This example shows you how to delete an intersection in a hole. Starting with this model:
The holes are in two hole feature sets: the three white holes in one hole feature set and the two magenta holes in another (currently active) hole feature set.
This shows there are three intersections with the selected hole.
This displays the selected intersection with a thicker outline:
This deletes intersection 1 and renames the remaining intersections from 2 and 3 to 1 and 2.
This updates the hole feature set to remove one intersection:
The deleted intersection.
The intersection with the other hole remains.