Issue: You have selected Run Energy Simulation, but there are linked models that are not set to Room Bounding.
Solution: It is recommended that you set elements to room bounding so that all key elements are included in the energy analytical model.
Click Close to close the task dialog. Then set Linked files containing building elements to room bounding. Then re-select Run Energy Simulation. See Room-Bounding Elements and Making an Element Room Bounding.